STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOSMA_87G00070Pentatricopeptide repeat-containing protein. (767 aa)    
Predicted Functional Partners:
ZOSMA_16G00170
Putative Pentatricopeptide repeat-containing protein.
  
   
 0.587
A0A0K9P1W0
Mitochondrial 28S ribosomal protein S29-like protein.
   
 
 0.578
A0A0K9PY57
Putative Pentatricopeptide repeat-containing protein.
  
   
 0.497
A0A0K9PTZ4
DYW_deaminase domain-containing protein.
      
 0.470
ZOSMA_81G00110
Pentatricopeptide repeat-containing protein.
  
   
 0.461
A0A0K9PRI1
30S ribosomal protein S11.
    
 
 0.455
ZOSMA_5G01210
Pentatricopeptide repeat protein.
  
     0.436
ZOSMA_91G00640
Gamma-tubulin complex component; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome; Belongs to the TUBGCP family.
    
  0.426
ZOSMA_37G00890
Pentatricopeptide repeat-containing protein.
      
 0.408
A0A0K9P5L2
Pentatricopeptide repeat-containing protein.
      
0.408
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.