STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOSMA_69G00300UDP-beta-L-Ara: arabinan alpha-1,5-L-arabinosyltransferase, family GT47; Belongs to the glycosyltransferase 47 family. (443 aa)    
Predicted Functional Partners:
ZOSMA_42G01040
Putative Exostosin-2.
    
 0.622
A0A0K9Q4D2
Putative Exostosin-2.
    
 0.587
A0A0K9PV48
Exostosin-like 2.
    
 0.492
A0A0K9PVN9
Uncharacterized protein.
    
 0.492
A0A0K9PBK2
Protein kinase; Belongs to the protein kinase superfamily.
   
  
 0.461
A0A0K9PH15
Thioredoxin domain-containing protein.
      
 0.429
ZOSMA_89G01320
Uncharacterized protein.
      
 0.426
A0A0K9NZT2
FPL domain-containing protein.
      
 0.422
ZOSMA_75G00160
Glycosyltransferases; Involved in the synthesis of glucuronoxylan hemicellulose in secondary cell walls; Belongs to the glycosyltransferase 43 family.
      
 0.420
A0A0K9PY24
Carboxypeptidase; Belongs to the peptidase S10 family.
      
 0.412
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.