STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0K9PC54Ribulose bisphosphate carboxylase/oxygenase activase. (432 aa)    
Predicted Functional Partners:
ZOSMA_36G00400
Putative 26S protease regulatory subunit; Belongs to the AAA ATPase family.
   
 0.983
ZOSMA_17G00470
26S proteasome non-ATPase regulatory subunit.
   
 0.983
A0A0K9PHP5
26S proteasome non-ATPase regulatory subunit.
   
 0.982
A0A0K9P2K1
Proteasome endopeptidase complex; Belongs to the peptidase T1A family.
  
 0.981
ZOSMA_47G00470
Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family.
  
 0.974
ZOSMA_1G00570
Proteasome endopeptidase complex.
  
 0.973
ZOSMA_1G02900
Putative 26S proteasome non-atpase regulatory subunit.
   
 0.971
ZOSMA_81G01110
Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family.
  
 0.968
A0A0K9PHR7
26S proteasome regulatory subunit N8.
  
 0.968
ZOSMA_48G00560
Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family.
   
 0.967
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.