STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0K9PC80Uncharacterized protein. (135 aa)    
Predicted Functional Partners:
ZOSMA_6G00760
Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
    
 0.823
A0A0K9PEC2
Putative L-asparaginase.
 
     0.820
PURA
Adenylosuccinate synthetase, chloroplastic; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP.
    
  0.817
ZOSMA_11G00180
Aspartate kinase.
     
 0.814
ZOSMA_17G01290
Aspartate aminotransferase.
   
 0.810
ZOSMA_52G00510
Isoaspartyl peptidase/L-asparaginase 1.
  
  
 
0.803
A0A0K9P8F7
Nitrilase 1.
  
 
  0.803
A0A0K9Q2K2
L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate.
    
  0.799
ZOSMA_5G01540
Histidine decarboxylase.
     
 0.758
ZOSMA_85G01130
Agmatinase; Belongs to the arginase family.
   
 
 0.724
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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