STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0K9PCE0Uncharacterized protein; Belongs to the synaptobrevin family. (223 aa)    
Predicted Functional Partners:
ZOSMA_37G00620
Putative Vacuolar protein sorting; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.800
ZOSMA_1G01130
Putative Synaptosomal associated protein.
   
 0.785
ZOSMA_52G00390
Uncharacterized protein.
    
 0.784
ZOSMA_83G00470
Syntaxin 43; Belongs to the syntaxin family.
    
 0.725
A0A0K9PL38
Protein VACUOLELESS1; Required for vacuole biogenesis and vacuole enlargment in dividing and expanding cells. Involved in the docking or fusion of prevacuolar vesicles; Belongs to the VPS16 family.
    
 
 0.697
A0A0K9P305
Vesicle transport v-SNARE 13.
    
 0.679
A0A0K9PSJ8
Vesicle transport v-SNARE 13.
    
 0.679
ZOSMA_89G00070
Exonuclease, phage-type.
    
 0.624
ZOSMA_85G00820
Syntaxin-22.
    
 0.624
ZOSMA_76G00570
Syntaxin-22; Belongs to the syntaxin family.
    
 0.624
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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