STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0K9PCG8Uncharacterized protein. (307 aa)    
Predicted Functional Partners:
A0A0K9PV71
YTH domain containing 2.
    
 0.967
A0A0K9PP38
Serine/threonine-protein phosphatase.
 
     0.900
A0A0K9Q3A7
Serine/threonine-protein phosphatase.
 
     0.887
A0A0K9PWY1
RNA polymerase II subunit a c-terminal domain phosphatase ssu72.
    
 0.804
ZOSMA_24G00530
Serine/threonine protein phosphatase 4 regulatory subunit.
    
 0.797
ZOSMA_37G01000
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.788
A0A0K9NWS0
Putative WD-repeat protein.
   
 0.785
A0A0K9P851
PP2A regulatory subunit TAP46.
    
 0.764
A0A0K9PVU1
Eukaryotic translation initiation factor 2 subunit alpha.
   
 0.757
ZOSMA_88G00400
WD repeat protein-like.
    
 0.702
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.