STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOSMA_27G00980Uncharacterized protein. (800 aa)    
Predicted Functional Partners:
ZOSMA_75G00440
C2H2 zinc finger protein.
    
 0.983
A0A0K9PSG1
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
  
 0.971
ZOSMA_83G00150
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.961
A0A0K9PED2
Protein transport protein SEC13; Belongs to the WD repeat SEC13 family.
   
 0.958
ZOSMA_24G00980
Nuclear pore protein.
    
 0.956
ZOSMA_1G01060
DUF5311 domain-containing protein.
   
 0.954
ZOSMA_5G01890
Nuclear pore complex protein NUP35.
    
 0.953
GATC
Glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in chloroplasts and mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the GatC family.
   
 0.946
A0A0K9PC83
Uncharacterized protein.
   
 0.942
ZOSMA_52G01070
Uncharacterized protein.
    
 0.927
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.