STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOSMA_21G01060Alba domain-containing protein. (346 aa)    
Predicted Functional Partners:
ZOSMA_20G01100
Ribonuclease P protein subunit p29; Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends.
    
 0.970
A0A0K9PD40
Uncharacterized protein.
    
 0.967
ZOSMA_97G00430
Uncharacterized protein.
    
 0.957
ZOSMA_6G00980
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 0.824
ZOSMA_10G01780
Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein.
   
 0.824
A0A0K9PP92
40S ribosomal protein S9-2; Belongs to the universal ribosomal protein uS4 family.
   
 
  0.587
A0A0K9PX52
40S ribosomal protein S9-2; Belongs to the universal ribosomal protein uS4 family.
   
 
  0.587
A0A0K9P5J7
Serine/threonine-protein kinase RIO1; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family.
     
 0.580
ZOSMA_86G00100
Putative U3 small nucleolar ribonucleoprotein IMP3.
   
 
  0.578
ZOSMA_69G00710
60S ribosomal protein L7a.
   
 0.570
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.