STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0K9PRQ9PsbP domain-containing protein. (302 aa)    
Predicted Functional Partners:
A0A0K9PIC1
Thylakoid lumenal 20 kDa protein.
   
 
 0.677
ZOSMA_42G00020
PsbP-like protein 1.
   
 
 0.661
ZOSMA_22G00960
PsbP-like protein 2.
   
 
 0.641
ZOSMA_54G00410
PsbP domain-containing protein 3, chloroplastic.
   
 
 0.633
ZOSMA_44G01560
PsbP domain-containing protein.
   
 
 0.633
ZOSMA_22G00940
Thylakoid lumenal 29.8 kDa protein.
     
 0.580
ZOSMA_85G01220
Oxygen-evolving enhancer protein, chloroplastic.
     
 0.491
ZOSMA_30G01090
Oxygen-evolving enhancer protein, chloroplastic.
     
 0.491
A0A0K9NU49
Thylakoid lumenal 19 kDa protein.
     
 0.471
A0A0K9PTZ5
PsbQ-like 3.
     
 0.467
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.