STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOSMA_16G01550Chorismate mutase. (260 aa)    
Predicted Functional Partners:
ZOSMA_69G00040
Chorismate synthase.
  
 
 0.982
A0A0K9PW30
Uncharacterized protein.
  
 
 0.947
A0A0K9Q5V9
O-succinylbenzoate synthase.
  
 
 0.947
ZOSMA_71G00440
Indole-3-glycerol-phosphate synthase.
  
 
 0.924
ZOSMA_5G00340
Phosphoribosylanthranilate isomerase.
  
 
 0.924
ZOSMA_11G00180
Aspartate kinase.
  
 
 0.924
ZOSMA_91G00690
Shikimate kinase.
  
 
 0.923
ZOSMA_7G01410
Shikimate kinase.
  
 
 0.923
ZOSMA_6G01230
Argininosuccinate synthase.
  
 
 0.899
ZOSMA_20G00960
Anthranilate synthase.
  
 
 0.898
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.