STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0K9Q6A5RRM domain-containing protein. (288 aa)    
Predicted Functional Partners:
A0A0K9PZA4
RRM domain-containing protein.
    
 
 0.848
ZOSMA_81G00550
Importin N-terminal domain-containing protein.
    
 
 0.807
ZOSMA_37G01340
RNA-binding protein.
  
 
 0.779
A0A0K9PVF6
Putative RNA-binding protein.
  
 
 
0.715
ZOSMA_14G01000
Uncharacterized protein.
  
 
 
0.571
A0A0K9Q5B6
RRM domain-containing protein.
  
  
 
0.569
A0A0K9P828
Uncharacterized protein.
  
 
 
0.560
A0A0K9P6H9
Uncharacterized protein.
  
 
  0.538
ZOSMA_29G01270
Uncharacterized protein.
  
 
  0.538
A0A0K9Q678
RNA binding protein.
  
 
  0.534
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.