Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BRCA2 | DMC1 | C1FJK2 | C1FJ81 | Uncharacterized protein. | DMC1 DNA recombinase; Belongs to the RecA family. | 0.886 |
BRCA2 | MICPUN_105511 | C1FJK2 | C1E508 | Uncharacterized protein. | Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses. | 0.507 |
BRCA2 | MICPUN_57387 | C1FJK2 | C1E2W2 | Uncharacterized protein. | XRCC2 DNA recombinase. | 0.836 |
BRCA2 | MICPUN_62284 | C1FJK2 | C1EDI7 | Uncharacterized protein. | DRBM domain-containing protein. | 0.967 |
BRCA2 | MICPUN_62527 | C1FJK2 | C1EE76 | Uncharacterized protein. | RING-type domain-containing protein. | 0.936 |
BRCA2 | MICPUN_75328 | C1FJK2 | C1E259 | Uncharacterized protein. | Uncharacterized protein. | 0.967 |
BRCA2 | MRE11 | C1FJK2 | C1ECB4 | Uncharacterized protein. | Mre11 DNA repair/recombination protein. | 0.820 |
BRCA2 | RAD51A | C1FJK2 | C1E452 | Uncharacterized protein. | DNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA- dependent ATPase activity. Unwinds duplex DNA. Component of the meiotic recombination pathway. Seems to play a role in mediating chromosome homology search, chromosome pairing and synapsis at early stages and probably chromosome crossing-over at later stages in meiosis. Probably is involved in the repair of meiotic double strand breaks (DBSs) and in homologous recombination; Belongs to the RecA family. RAD51 subfamily. | 0.858 |
BRCA2 | RAD51C | C1FJK2 | C1FDH7 | Uncharacterized protein. | Rad51 DNA recombinase 3. | 0.886 |
BRCA2 | XRCC3 | C1FJK2 | C1ED40 | Uncharacterized protein. | XRCC3 DNA recombinase. | 0.930 |
DMC1 | BRCA2 | C1FJ81 | C1FJK2 | DMC1 DNA recombinase; Belongs to the RecA family. | Uncharacterized protein. | 0.886 |
DMC1 | MICPUN_105511 | C1FJ81 | C1E508 | DMC1 DNA recombinase; Belongs to the RecA family. | Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses. | 0.633 |
DMC1 | MICPUN_57387 | C1FJ81 | C1E2W2 | DMC1 DNA recombinase; Belongs to the RecA family. | XRCC2 DNA recombinase. | 0.848 |
DMC1 | MICPUN_62284 | C1FJ81 | C1EDI7 | DMC1 DNA recombinase; Belongs to the RecA family. | DRBM domain-containing protein. | 0.967 |
DMC1 | MICPUN_62527 | C1FJ81 | C1EE76 | DMC1 DNA recombinase; Belongs to the RecA family. | RING-type domain-containing protein. | 0.704 |
DMC1 | MICPUN_75328 | C1FJ81 | C1E259 | DMC1 DNA recombinase; Belongs to the RecA family. | Uncharacterized protein. | 0.967 |
DMC1 | MRE11 | C1FJ81 | C1ECB4 | DMC1 DNA recombinase; Belongs to the RecA family. | Mre11 DNA repair/recombination protein. | 0.774 |
DMC1 | RAD51A | C1FJ81 | C1E452 | DMC1 DNA recombinase; Belongs to the RecA family. | DNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA- dependent ATPase activity. Unwinds duplex DNA. Component of the meiotic recombination pathway. Seems to play a role in mediating chromosome homology search, chromosome pairing and synapsis at early stages and probably chromosome crossing-over at later stages in meiosis. Probably is involved in the repair of meiotic double strand breaks (DBSs) and in homologous recombination; Belongs to the RecA family. RAD51 subfamily. | 0.805 |
DMC1 | XRCC3 | C1FJ81 | C1ED40 | DMC1 DNA recombinase; Belongs to the RecA family. | XRCC3 DNA recombinase. | 0.960 |
MICPUN_105511 | BRCA2 | C1E508 | C1FJK2 | Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses. | Uncharacterized protein. | 0.507 |
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