STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MICPUN_97627CPSF_A domain-containing protein. (1114 aa)    
Predicted Functional Partners:
MICPUN_84769
CULLIN_2 domain-containing protein; Belongs to the cullin family.
  
 0.996
MICPUN_68188
Uncharacterized protein.
    
 0.992
MICPUN_58718
Uncharacterized protein.
    
 0.986
MICPUN_62954
Uncharacterized protein.
    
 0.984
MICPUN_62121
Uncharacterized protein.
    
 0.982
RBX1
E3 ubiquitin ligase Rbx1.
    
 0.980
MICPUN_100957
Uncharacterized protein.
    
 
 0.975
MICPUN_78447
PCI domain-containing protein.
    
 0.952
MICPUN_97217
DNA_LIGASE_A3 domain-containing protein.
    
 0.944
MICPUN_106521
Det1-like protein.
    
 
 0.922
Your Current Organism:
Micromonas commoda
NCBI taxonomy Id: 296587
Other names: CCMP2709, M. commoda, Micromonas commoda van Baren, Bachy & Worden, 2016, Micromonas pusilla NOUM17, Micromonas pusilla RCC299, Micromonas sp. CCMP1195, Micromonas sp. CCMP1764, Micromonas sp. CCMP492, Micromonas sp. NEPCC29, Micromonas sp. RCC 299, Micromonas sp. RCC299, Micromonas sp. RCC372, Micromonas sp. RCC447, Micromonas sp. RCC448, Micromonas sp. RCC449, Micromonas sp. RCC450, Micromonas sp. RCC472, Micromonas sp. RCC570, Micromonas sp. RCC676, Micromonas sp. RCC803, Micromonas sp. RCC804, Micromonas sp. RCC805, Micromonas sp. RCC808, Micromonas sp. RCC836, RCC299
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.