STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MICPUN_62298Uncharacterized protein. (75 aa)    
Predicted Functional Partners:
MICPUN_59800
Heat shock transcription factor.
    
 0.916
MICPUN_77031
Response regulatory domain-containing protein.
    
 0.916
MICPUN_55695
Heat shock transcription factor.
    
 0.537
MICPUN_58153
Heat shock transcription factor.
    
 0.537
MICPUN_101019
CBS domain-containing protein.
    
 0.537
MICPUN_104615
Heat shock transcription factor.
    
 0.537
MICPUN_105904
Heat shock transcription factor.
    
 0.537
MICPUN_108997
Heat shock transcription factor.
    
 0.537
MICPUN_106749
HATPase_c domain-containing protein.
     
 0.494
MICPUN_59736
Uncharacterized protein.
     
 0.494
Your Current Organism:
Micromonas commoda
NCBI taxonomy Id: 296587
Other names: CCMP2709, M. commoda, Micromonas commoda van Baren, Bachy & Worden, 2016, Micromonas pusilla NOUM17, Micromonas pusilla RCC299, Micromonas sp. CCMP1195, Micromonas sp. CCMP1764, Micromonas sp. CCMP492, Micromonas sp. NEPCC29, Micromonas sp. RCC 299, Micromonas sp. RCC299, Micromonas sp. RCC372, Micromonas sp. RCC447, Micromonas sp. RCC448, Micromonas sp. RCC449, Micromonas sp. RCC450, Micromonas sp. RCC472, Micromonas sp. RCC570, Micromonas sp. RCC676, Micromonas sp. RCC803, Micromonas sp. RCC804, Micromonas sp. RCC805, Micromonas sp. RCC808, Micromonas sp. RCC836, RCC299
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