STRINGSTRING
XP_002505108.1 protein (Micromonas sp. RCC299) - STRING interaction network
"XP_002505108.1" - Uncharacterized protein in Micromonas sp. RCC299
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_002505108.1Uncharacterized protein (280 aa)    
Predicted Functional Partners:
XP_002499581.1
Uncharacterized protein (199 aa)
           
  0.743
XP_002499876.1
SNF2 super family; Predicted chromatin remodeling protein similar to Homo Sapiens CHD1L (chromodomain helicase DNA binding protein 1-like), a subgroup within the SNF2 superfamily of ATP dependent helicases. ChromDB ID- CHR20114; Snf2, Ris1, Rad26 superclasses (2637 aa)
     
        0.551
XP_002504965.1
Uncharacterized protein (869 aa)
           
  0.507
XP_002507131.1
Centrosome protein SAS6; Expressed (535 aa)
     
        0.499
XP_002504829.1
Uncharacterized protein (1805 aa)
     
        0.497
XP_002508340.1
Uncharacterized protein (654 aa)
     
        0.491
XP_002506867.1
Uncharacterized protein (717 aa)
   
 
0.477
CDC25
Uncharacterized protein; Putative dual phosphatase cdc25. Control cell division cycle (553 aa)
     
   
  0.465
XP_002503594.1
Uncharacterized protein (309 aa)
     
        0.445
XP_002507500.1
Shows homology to sister chromatid arm cohesin proteins (synaptonemal complex components) (1057 aa)
           
  0.434
Your Current Organism:
Micromonas sp. RCC299
NCBI taxonomy Id: 296587
Other names: M. sp. RCC299, Micromonas pusilla NOUM17, Micromonas pusilla RCC299, Micromonas sp. RCC 299, Micromonas sp. RCC299
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