STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MICPUN_109216alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (517 aa)    
Predicted Functional Partners:
MANA
alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.
  
 
0.963
MICPUN_68567
Glycosyltransferase family 13 protein.
    
 0.950
MICPUN_55432
Glycosyltransferase family 13 protein.
     
  0.900
MICPUN_67567
Uncharacterized protein.
  
   
 0.608
MICPUN_97702
alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.
  
  
0.591
MICPUN_102676
Uncharacterized protein.
      
 0.572
MICPUN_55318
Glycosyltransferase family 24 protein.
  
 
 0.559
MICPUN_79438
Uncharacterized protein.
 
      0.550
RER1
Protein RER1; Involved in the retrieval of endoplasmic reticulum membrane proteins from the early Golgi compartment.
      
 0.539
MICPUN_78996
PRKCSH domain-containing protein.
      
 0.527
Your Current Organism:
Micromonas commoda
NCBI taxonomy Id: 296587
Other names: CCMP2709, M. commoda, Micromonas commoda van Baren, Bachy & Worden, 2016, Micromonas pusilla NOUM17, Micromonas pusilla RCC299, Micromonas sp. CCMP1195, Micromonas sp. CCMP1764, Micromonas sp. CCMP492, Micromonas sp. NEPCC29, Micromonas sp. RCC 299, Micromonas sp. RCC299, Micromonas sp. RCC372, Micromonas sp. RCC447, Micromonas sp. RCC448, Micromonas sp. RCC449, Micromonas sp. RCC450, Micromonas sp. RCC472, Micromonas sp. RCC570, Micromonas sp. RCC676, Micromonas sp. RCC803, Micromonas sp. RCC804, Micromonas sp. RCC805, Micromonas sp. RCC808, Micromonas sp. RCC836, RCC299
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.