STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MICPUN_93204Uncharacterized protein. (684 aa)    
Predicted Functional Partners:
MICPUN_62484
Uncharacterized protein.
 
 0.902
MICPUN_87762
Thioredoxin domain-containing protein.
  
 
 0.885
Nii
Nadh-nitrite reductase.
  
 0.855
MICPUN_54830
Adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate.
  
  
 0.813
MICPUN_105867
Uncharacterized protein.
  
 0.782
MICPUN_74512
Uncharacterized protein.
   
 0.773
MICPUN_96121
Uncharacterized protein; Belongs to the cytochrome P450 family.
 
  
 
 0.766
Nia
Nitrate reductase apoenzyme.
    
 0.704
MICPUN_68463
Uncharacterized protein.
    
 0.704
MICPUN_79549
zf-NOSIP domain-containing protein.
    
 0.658
Your Current Organism:
Micromonas commoda
NCBI taxonomy Id: 296587
Other names: CCMP2709, M. commoda, Micromonas commoda van Baren, Bachy & Worden, 2016, Micromonas pusilla NOUM17, Micromonas pusilla RCC299, Micromonas sp. CCMP1195, Micromonas sp. CCMP1764, Micromonas sp. CCMP492, Micromonas sp. NEPCC29, Micromonas sp. RCC 299, Micromonas sp. RCC299, Micromonas sp. RCC372, Micromonas sp. RCC447, Micromonas sp. RCC448, Micromonas sp. RCC449, Micromonas sp. RCC450, Micromonas sp. RCC472, Micromonas sp. RCC570, Micromonas sp. RCC676, Micromonas sp. RCC803, Micromonas sp. RCC804, Micromonas sp. RCC805, Micromonas sp. RCC808, Micromonas sp. RCC836, RCC299
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.