STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bpro_0551Dihydropyrimidinase. (478 aa)    
Predicted Functional Partners:
pyrB
Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
 
 0.971
Bpro_0379
Amidase, hydantoinase/carbamoylase.
 
 
 0.952
Bpro_0419
Amidase, hydantoinase/carbamoylase.
 
 
 0.952
Bpro_1498
Amidase, hydantoinase/carbamoylase.
 
 
 0.949
Bpro_3330
Amidase, hydantoinase/carbamoylase.
 
 
 0.948
Bpro_1423
Amidase, hydantoinase/carbamoylase.
  
 
 0.934
carB
Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family.
 
 
 0.921
carA
Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family.
 
  
 0.910
Bpro_0686
Dihydropyrimidinase.
  
  
 
0.909
Bpro_0552
Asp/Glu racemase.
 
     0.874
Your Current Organism:
Polaromonas sp. JS666
NCBI taxonomy Id: 296591
Other names: P. sp. JS666
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