Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Bpro_1171 | Bpro_1172 | Chaperone DnaJ-like protein. | Hypothetical protein. | 0.865 |
Bpro_1171 | Bpro_1173 | Chaperone DnaJ-like protein. | Conserved hypothetical protein. | 0.563 |
Bpro_1171 | Bpro_1174 | Chaperone DnaJ-like protein. | Hypothetical protein. | 0.552 |
Bpro_1171 | Bpro_1175 | Chaperone DnaJ-like protein. | Conserved hypothetical protein. | 0.497 |
Bpro_1171 | Bpro_1176 | Chaperone DnaJ-like protein. | Isoprenylcysteine carboxyl methyltransferase. | 0.538 |
Bpro_1171 | Bpro_1177 | Chaperone DnaJ-like protein. | Hypothetical protein. | 0.454 |
Bpro_1171 | Bpro_1178 | Chaperone DnaJ-like protein. | Heavy metal translocating P-type ATPase. | 0.478 |
Bpro_1172 | Bpro_1171 | Hypothetical protein. | Chaperone DnaJ-like protein. | 0.865 |
Bpro_1172 | Bpro_1173 | Hypothetical protein. | Conserved hypothetical protein. | 0.563 |
Bpro_1172 | Bpro_1174 | Hypothetical protein. | Hypothetical protein. | 0.552 |
Bpro_1172 | Bpro_1175 | Hypothetical protein. | Conserved hypothetical protein. | 0.501 |
Bpro_1172 | Bpro_1176 | Hypothetical protein. | Isoprenylcysteine carboxyl methyltransferase. | 0.502 |
Bpro_1172 | Bpro_1177 | Hypothetical protein. | Hypothetical protein. | 0.454 |
Bpro_1173 | Bpro_1171 | Conserved hypothetical protein. | Chaperone DnaJ-like protein. | 0.563 |
Bpro_1173 | Bpro_1172 | Conserved hypothetical protein. | Hypothetical protein. | 0.563 |
Bpro_1173 | Bpro_1174 | Conserved hypothetical protein. | Hypothetical protein. | 0.763 |
Bpro_1173 | Bpro_1175 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.879 |
Bpro_1173 | Bpro_1176 | Conserved hypothetical protein. | Isoprenylcysteine carboxyl methyltransferase. | 0.839 |
Bpro_1173 | Bpro_1177 | Conserved hypothetical protein. | Hypothetical protein. | 0.611 |
Bpro_1173 | Bpro_1178 | Conserved hypothetical protein. | Heavy metal translocating P-type ATPase. | 0.455 |
page 1 of 4