Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Bpro_1295 | Bpro_1296 | Bpro_1295 | Bpro_1296 | Putative lipoprotein. | Tetratricopeptide TPR_4. | 0.859 |
Bpro_1295 | Bpro_1298 | Bpro_1295 | Bpro_1298 | Putative lipoprotein. | Conserved hypothetical protein. | 0.634 |
Bpro_1295 | Bpro_1299 | Bpro_1295 | Bpro_1299 | Putative lipoprotein. | A/G-specific DNA-adenine glycosylase; Adenine glycosylase active on G-A mispairs. | 0.532 |
Bpro_1295 | ispE | Bpro_1295 | Bpro_1294 | Putative lipoprotein. | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. | 0.788 |
Bpro_1295 | mutM | Bpro_1295 | Bpro_1297 | Putative lipoprotein. | DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates. | 0.595 |
Bpro_1296 | Bpro_1295 | Bpro_1296 | Bpro_1295 | Tetratricopeptide TPR_4. | Putative lipoprotein. | 0.859 |
Bpro_1296 | Bpro_1298 | Bpro_1296 | Bpro_1298 | Tetratricopeptide TPR_4. | Conserved hypothetical protein. | 0.425 |
Bpro_1296 | ispE | Bpro_1296 | Bpro_1294 | Tetratricopeptide TPR_4. | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. | 0.663 |
Bpro_1296 | mutM | Bpro_1296 | Bpro_1297 | Tetratricopeptide TPR_4. | DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates. | 0.606 |
Bpro_1298 | Bpro_1295 | Bpro_1298 | Bpro_1295 | Conserved hypothetical protein. | Putative lipoprotein. | 0.634 |
Bpro_1298 | Bpro_1296 | Bpro_1298 | Bpro_1296 | Conserved hypothetical protein. | Tetratricopeptide TPR_4. | 0.425 |
Bpro_1298 | Bpro_1299 | Bpro_1298 | Bpro_1299 | Conserved hypothetical protein. | A/G-specific DNA-adenine glycosylase; Adenine glycosylase active on G-A mispairs. | 0.600 |
Bpro_1298 | mutM | Bpro_1298 | Bpro_1297 | Conserved hypothetical protein. | DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates. | 0.620 |
Bpro_1299 | Bpro_1295 | Bpro_1299 | Bpro_1295 | A/G-specific DNA-adenine glycosylase; Adenine glycosylase active on G-A mispairs. | Putative lipoprotein. | 0.532 |
Bpro_1299 | Bpro_1298 | Bpro_1299 | Bpro_1298 | A/G-specific DNA-adenine glycosylase; Adenine glycosylase active on G-A mispairs. | Conserved hypothetical protein. | 0.600 |
Bpro_1299 | ispE | Bpro_1299 | Bpro_1294 | A/G-specific DNA-adenine glycosylase; Adenine glycosylase active on G-A mispairs. | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. | 0.608 |
Bpro_1299 | mutM | Bpro_1299 | Bpro_1297 | A/G-specific DNA-adenine glycosylase; Adenine glycosylase active on G-A mispairs. | DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates. | 0.735 |
Bpro_1299 | nth | Bpro_1299 | Bpro_2747 | A/G-specific DNA-adenine glycosylase; Adenine glycosylase active on G-A mispairs. | Endonuclease III / DNA-(apurinic or apyrimidinic site) lyase; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | 0.467 |
Bpro_1299 | polA | Bpro_1299 | Bpro_1729 | A/G-specific DNA-adenine glycosylase; Adenine glycosylase active on G-A mispairs. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.424 |
coaE | ispE | Bpro_0844 | Bpro_1294 | Dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family. | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. | 0.442 |
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