STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
argGArgininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 2 subfamily. (446 aa)    
Predicted Functional Partners:
argF
Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family.
  
 
 0.989
carB
Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family.
 
 
 0.985
argH
Argininosuccinate lyase.
 
 
 0.984
argH-2
Argininosuccinate lyase.
 
 
 0.983
Bpro_4391
Argininosuccinate lyase; Belongs to the lyase 1 family. Argininosuccinate lyase subfamily.
 
 
 0.982
Bpro_3411
Acetylornithine deacetylase / acetylornithine deacetylase ArgE, Metallo peptidase, MEROPS family M20A.
 
 0.955
Bpro_2527
Acetylornithine deacetylase / acetylornithine deacetylase ArgE, Metallo peptidase, MEROPS family M20A.
 
 0.954
argA
N-acetylglutamate synthase; Belongs to the acetyltransferase family. ArgA subfamily.
 
  
 0.943
Bpro_0411
Acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase.
  
 0.935
purA
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
  
 
 0.935
Your Current Organism:
Polaromonas sp. JS666
NCBI taxonomy Id: 296591
Other names: P. sp. JS666
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