Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Bpro_1235 | Bpro_2451 | Serine/threonine protein kinase. | Putative adenylate/guanylate cyclase. | 0.568 |
Bpro_1235 | Bpro_2619 | Serine/threonine protein kinase. | Protein serine/threonine phosphatase. | 0.841 |
Bpro_1235 | Bpro_2735 | Serine/threonine protein kinase. | FHA domain containing protein. | 0.743 |
Bpro_1235 | Bpro_3274 | Serine/threonine protein kinase. | Protein serine/threonine phosphatase. | 0.533 |
Bpro_1235 | Bpro_4677 | Serine/threonine protein kinase. | FHA domain containing protein. | 0.745 |
Bpro_1337 | Bpro_2451 | Serine/threonine protein kinase. | Putative adenylate/guanylate cyclase. | 0.574 |
Bpro_1337 | Bpro_2619 | Serine/threonine protein kinase. | Protein serine/threonine phosphatase. | 0.842 |
Bpro_1337 | Bpro_2735 | Serine/threonine protein kinase. | FHA domain containing protein. | 0.789 |
Bpro_1337 | Bpro_3274 | Serine/threonine protein kinase. | Protein serine/threonine phosphatase. | 0.786 |
Bpro_1337 | Bpro_4677 | Serine/threonine protein kinase. | FHA domain containing protein. | 0.794 |
Bpro_1868 | Bpro_2619 | Glycine cleavage system T protein. | Protein serine/threonine phosphatase. | 0.520 |
Bpro_1868 | Bpro_2669 | Glycine cleavage system T protein. | Dihydrolipoamide dehydrogenase. | 0.988 |
Bpro_1868 | Bpro_3274 | Glycine cleavage system T protein. | Protein serine/threonine phosphatase. | 0.534 |
Bpro_2451 | Bpro_1235 | Putative adenylate/guanylate cyclase. | Serine/threonine protein kinase. | 0.568 |
Bpro_2451 | Bpro_1337 | Putative adenylate/guanylate cyclase. | Serine/threonine protein kinase. | 0.574 |
Bpro_2451 | Bpro_2619 | Putative adenylate/guanylate cyclase. | Protein serine/threonine phosphatase. | 0.577 |
Bpro_2451 | Bpro_3274 | Putative adenylate/guanylate cyclase. | Protein serine/threonine phosphatase. | 0.756 |
Bpro_2617 | Bpro_2618 | Helicase c2. | Protein of unknown function DUF465. | 0.806 |
Bpro_2617 | Bpro_2619 | Helicase c2. | Protein serine/threonine phosphatase. | 0.602 |
Bpro_2618 | Bpro_2617 | Protein of unknown function DUF465. | Helicase c2. | 0.806 |
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