STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bpro_3111Vanillin synthase / trans-feruloyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (264 aa)    
Predicted Functional Partners:
Bpro_3141
acyl-CoA dehydrogenase-like protein.
  
 0.936
Bpro_3112
trans-feruloyl-CoA synthase.
 
 
 0.892
ahcY
Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.
    
 0.816
Bpro_2830
Cystathionine beta-synthase.
   
 0.812
Bpro_0172
Methionine synthase (B12-dependent).
     
 0.806
Bpro_1836
O-acetylhomoserine sulfhydrolase.
   
 
  0.804
Bpro_3388
Methionine synthase, vitamin-B12 independent.
     
 0.803
Bpro_3466
Methionine synthase (B12-independent).
     
 0.803
Bpro_3113
Acetyl-CoA C-acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.801
Bpro_0174
Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
     
  0.800
Your Current Organism:
Polaromonas sp. JS666
NCBI taxonomy Id: 296591
Other names: P. sp. JS666
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