STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bpro_3274Protein serine/threonine phosphatase. (594 aa)    
Predicted Functional Partners:
Bpro_3275
Response regulator receiver (CheY-like) and ANTAR domain protein.
 
  
 0.802
Bpro_2619
Protein serine/threonine phosphatase.
 
 
 0.796
Bpro_2669
Dihydrolipoamide dehydrogenase.
  
 0.789
Bpro_1337
Serine/threonine protein kinase.
 
 
 0.786
Bpro_2451
Putative adenylate/guanylate cyclase.
 
 
 0.756
Bpro_2735
FHA domain containing protein.
 
 
 0.751
Bpro_4677
FHA domain containing protein.
 
 
 0.746
Bpro_4216
Integral membrane protein-like protein.
  
 0.676
rsgA
GTPase EngC; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.
  
  
 0.632
Bpro_4173
Formyl transferase-like protein.
  
 
 0.595
Your Current Organism:
Polaromonas sp. JS666
NCBI taxonomy Id: 296591
Other names: P. sp. JS666
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.