Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Bpro_0591 | Bpro_1632 | Enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | 3-hydroxyacyl-CoA dehydrogenase. | 0.800 |
Bpro_0591 | Bpro_2750 | Enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | Enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.436 |
Bpro_0591 | Bpro_2957 | Enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | 3-hydroxyacyl-CoA dehydrogenase. | 0.797 |
Bpro_0591 | Bpro_3023 | Enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | Enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.458 |
Bpro_0591 | Bpro_3111 | Enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | Vanillin synthase / trans-feruloyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.449 |
Bpro_0591 | Bpro_3677 | Enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | Enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.713 |
Bpro_1632 | Bpro_0591 | 3-hydroxyacyl-CoA dehydrogenase. | Enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.800 |
Bpro_1632 | Bpro_1633 | 3-hydroxyacyl-CoA dehydrogenase. | Enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.991 |
Bpro_1632 | Bpro_2750 | 3-hydroxyacyl-CoA dehydrogenase. | Enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.764 |
Bpro_1632 | Bpro_2957 | 3-hydroxyacyl-CoA dehydrogenase. | 3-hydroxyacyl-CoA dehydrogenase. | 0.914 |
Bpro_1632 | Bpro_2958 | 3-hydroxyacyl-CoA dehydrogenase. | Enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.842 |
Bpro_1632 | Bpro_3023 | 3-hydroxyacyl-CoA dehydrogenase. | Enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.807 |
Bpro_1632 | Bpro_3111 | 3-hydroxyacyl-CoA dehydrogenase. | Vanillin synthase / trans-feruloyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.800 |
Bpro_1632 | Bpro_3677 | 3-hydroxyacyl-CoA dehydrogenase. | Enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.692 |
Bpro_1632 | Bpro_3834 | 3-hydroxyacyl-CoA dehydrogenase. | Enoyl-CoA hydratase. | 0.844 |
Bpro_1632 | Bpro_4708 | 3-hydroxyacyl-CoA dehydrogenase. | Enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.866 |
Bpro_1633 | Bpro_1632 | Enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family. | 3-hydroxyacyl-CoA dehydrogenase. | 0.991 |
Bpro_1633 | Bpro_2750 | Enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family. | Enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.796 |
Bpro_1633 | Bpro_2957 | Enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family. | 3-hydroxyacyl-CoA dehydrogenase. | 0.958 |
Bpro_1633 | Bpro_3023 | Enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family. | Enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.478 |
page 1 of 5