STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bpro_4678Protein serine/threonine phosphatase. (261 aa)    
Predicted Functional Partners:
Bpro_4677
FHA domain containing protein.
 
 
 0.926
Bpro_1235
Serine/threonine protein kinase.
 
 0.877
Bpro_1337
Serine/threonine protein kinase.
 
 
 0.844
Bpro_2735
FHA domain containing protein.
 
 
 0.730
Bpro_2669
Dihydrolipoamide dehydrogenase.
  
 0.683
Bpro_3274
Protein serine/threonine phosphatase.
 
 
0.565
Bpro_1868
Glycine cleavage system T protein.
   
 0.520
Bpro_4173
Formyl transferase-like protein.
 
   0.509
Bpro_2451
Putative adenylate/guanylate cyclase.
 
 
 0.468
Bpro_4679
Hypothetical protein.
       0.450
Your Current Organism:
Polaromonas sp. JS666
NCBI taxonomy Id: 296591
Other names: P. sp. JS666
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.