STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bpro_4732Putative D--3-hydroxybutyrate oligomer hydrolase lipoprotein transmembrane; Participates in the degradation of poly-3-hydroxybutyrate (PHB). It works downstream of poly(3-hydroxybutyrate) depolymerase, hydrolyzing D(-)-3-hydroxybutyrate oligomers of various length (3HB- oligomers) into 3HB-monomers; Belongs to the D-(-)-3-hydroxybutyrate oligomer hydrolase family. (706 aa)    
Predicted Functional Partners:
Bpro_2173
Polyhydroxyalkanoate depolymerase, intracellular.
  
  
 0.921
Bpro_2705
3-hydroxybutyrate dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
     
 0.901
Bpro_1839
Intracellular polyhydroxyalkanoate depolymerase.
     
 0.900
Bpro_3117
Porin, Gram-negative type.
  
     0.573
Bpro_1248
Putative membrane protein.
  
     0.526
Bpro_4074
Putative chromosome segregation ATPase.
  
     0.525
Bpro_4026
Hypothetical protein.
  
     0.513
Bpro_4558
Porin, Gram-negative type.
  
     0.505
Bpro_0746
Outer membrane protein (porin)-like protein.
  
     0.486
Bpro_1655
Conserved hypothetical protein.
  
     0.472
Your Current Organism:
Polaromonas sp. JS666
NCBI taxonomy Id: 296591
Other names: P. sp. JS666
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