STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D2SPL4WD_REPEATS_REGION domain-containing protein. (321 aa)    
Predicted Functional Partners:
A0A0D2PS42
WD_REPEATS_REGION domain-containing protein.
  
  
 
0.900
A0A0D2QII9
Uncharacterized protein.
    
 0.861
A0A0D2QJ83
TPR_REGION domain-containing protein.
    
 0.795
PHP
Uncharacterized protein.
    
 0.753
A0A0D2U6A6
Uncharacterized protein.
    
 0.739
A0A0D2VHL2
Uncharacterized protein.
    
 0.739
A0A0D2QGB2
Uncharacterized protein.
   
 0.738
A0A0D2RT70
Uncharacterized protein.
   
 0.738
A0A0D2TP56
Uncharacterized protein.
  
 
 0.736
A0A0D2M2G9
Uncharacterized protein.
    
 0.676
Your Current Organism:
Gossypium raimondii
NCBI taxonomy Id: 29730
Other names: G. raimondii, Gossypium raimondii Ulbr.
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