STRINGSTRING
Gorai.002G169300.1 protein (Gossypium raimondii) - STRING interaction network
"Gorai.002G169300.1" - annotation not available in Gossypium raimondii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gorai.002G169300.1annotation not available (317 aa)    
Predicted Functional Partners:
Gorai.012G122600.1
Uncharacterized protein; JAG (265 aa)
           
  0.635
Gorai.005G191500.1
Uncharacterized protein; JAG (254 aa)
           
  0.635
Gorai.011G011700.1
Uncharacterized protein; BUM,BUM1,SHL,STM,WAM,WAM1 (351 aa)
           
  0.537
Gorai.010G183800.1
Uncharacterized protein; BUM,BUM1,SHL,STM,WAM,WAM1 (355 aa)
           
  0.537
Gorai.009G181500.1
Uncharacterized protein; BUM,BUM1,SHL,STM,WAM,WAM1 (353 aa)
           
  0.537
Gorai.011G024100.1
Uncharacterized protein; AHL,ATAHL,HL (461 aa)
           
  0.443
Gorai.010G150200.1
Uncharacterized protein; AHL,ATAHL,HL (450 aa)
           
  0.443
Gorai.002G074400.1
Uncharacterized protein; AHL,ATAHL,HL (382 aa)
           
  0.443
Your Current Organism:
Gossypium raimondii
NCBI taxonomy Id: 29730
Other names: G. raimondii, Gossypium raimondii, Gossypium raimondii Ulbr.
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