STRINGSTRING
Gorai.004G271600.1 protein (Gossypium raimondii) - STRING interaction network
"Gorai.004G271600.1" - Uncharacterized protein in Gossypium raimondii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gorai.004G271600.1Uncharacterized protein; DBB3,LZF1,STH3 (122 aa)    
Predicted Functional Partners:
Gorai.004G274100.1
Uncharacterized protein; HY5,TED 5 (169 aa)
     
 
  0.810
Gorai.011G011200.1
Uncharacterized protein; ATCOP1,COP1,DET340,EMB168,FUS1 (675 aa)
       
 
  0.650
Gorai.007G170000.1
Uncharacterized protein; ATCOP1,COP1,DET340,EMB168,FUS1 (723 aa)
       
 
  0.650
Gorai.008G261400.1
Uncharacterized protein; NTL9 (859 aa)
           
  0.565
Gorai.003G073300.1
Uncharacterized protein; NTL9 (635 aa)
           
  0.565
Gorai.013G172500.1
Uncharacterized protein; ATBZIP61,BZIP61 (319 aa)
           
  0.519
Gorai.007G325700.1
Uncharacterized protein; ATBZIP61,BZIP61 (280 aa)
           
  0.519
Gorai.006G047000.1
Uncharacterized protein; FRS5 (861 aa)
           
  0.519
Gorai.002G064900.1
Uncharacterized protein; ATBZIP61,BZIP61 (320 aa)
           
  0.519
Gorai.008G274500.1
annotation not available (307 aa)
     
   
  0.512
Your Current Organism:
Gossypium raimondii
NCBI taxonomy Id: 29730
Other names: G. raimondii, Gossypium raimondii, Gossypium raimondii Ulbr.
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