STRINGSTRING
Gorai.006G172800.1 protein (Gossypium raimondii) - STRING interaction network
"Gorai.006G172800.1" - Uncharacterized protein in Gossypium raimondii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gorai.006G172800.1Uncharacterized protein; ATMYB3R5,MYB3R-5 (551 aa)    
Predicted Functional Partners:
Gorai.007G149100.1
Uncharacterized protein; AtPHR1,PHR1 (478 aa)
           
  0.618
Gorai.011G176900.1
annotation not available (850 aa)
     
 
  0.605
Gorai.005G051200.1
annotation not available (874 aa)
     
 
  0.605
Gorai.011G010900.1
Uncharacterized protein; ATEHD2,EHD2; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family (545 aa)
     
 
  0.572
Gorai.008G287300.1
Uncharacterized protein; EDE1 (485 aa)
           
  0.572
Gorai.009G047900.1
Uncharacterized protein; AtAUR1,AUR1; Belongs to the protein kinase superfamily (294 aa)
     
 
  0.564
Gorai.001G024900.1
Uncharacterized protein; AtAUR1,AUR1; Belongs to the protein kinase superfamily (292 aa)
     
 
  0.564
Gorai.003G113800.1
Uncharacterized protein; ATBAG7,BAG7 (394 aa)
           
  0.562
Gorai.013G255700.1
Uncharacterized protein; ATSIZ1,SIZ1 (873 aa)
     
 
  0.555
Gorai.013G255600.1
Uncharacterized protein; ATSIZ1,SIZ1 (870 aa)
     
 
  0.555
Your Current Organism:
Gossypium raimondii
NCBI taxonomy Id: 29730
Other names: G. raimondii, Gossypium raimondii, Gossypium raimondii Ulbr.
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