STRINGSTRING
Gorai.009G295000.1 protein (Gossypium raimondii) - STRING interaction network
"Gorai.009G295000.1" - Uncharacterized protein in Gossypium raimondii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gorai.009G295000.1Uncharacterized protein; ASL11,LBD15 (228 aa)    
Predicted Functional Partners:
Gorai.013G140700.1
Uncharacterized protein; ANAC030,VND7 (314 aa)
           
  0.635
Gorai.010G078900.1
Uncharacterized protein; anac075,NAC075 (476 aa)
           
  0.551
Gorai.009G028900.1
Uncharacterized protein; anac075,NAC075 (464 aa)
           
  0.551
Gorai.009G454000.1
Uncharacterized protein; AtMYB103,ATMYB80,MS188,MYB103 (336 aa)
           
  0.504
Gorai.007G197900.1
GATA transcription factor; Transcriptional activator that specifically binds 5’- GATA-3’ or 5’-GAT-3’ motifs within gene promoters (351 aa)
           
  0.487
Gorai.007G049700.1
GATA transcription factor; Transcriptional activator that specifically binds 5’- GATA-3’ or 5’-GAT-3’ motifs within gene promoters (379 aa)
           
  0.487
Gorai.004G138300.1
Uncharacterized protein; AtMYB103,MYB103 (318 aa)
           
  0.487
Gorai.003G155400.1
Uncharacterized protein; AtMYB103,MYB103 (324 aa)
           
  0.487
Gorai.008G113200.1
annotation not available (499 aa)
           
  0.407
Gorai.001G197500.1
Uncharacterized protein; BIM2 (328 aa)
           
  0.407
Your Current Organism:
Gossypium raimondii
NCBI taxonomy Id: 29730
Other names: G. raimondii, Gossypium raimondii, Gossypium raimondii Ulbr.
Server load: low (10%) [HD]