STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSPL7_VITVICASP-like protein 1D1; Belongs to the Casparian strip membrane proteins (CASP) family. (208 aa)    
Predicted Functional Partners:
D7SVF0_VITVI
AAI domain-containing protein; Belongs to the plant LTP family.
   
  
 0.643
D7U210_VITVI
Lipase_GDSL domain-containing protein; Belongs to the 'GDSL' lipolytic enzyme family.
      
 0.617
E0CR65_VITVI
Lipase_GDSL domain-containing protein; Belongs to the 'GDSL' lipolytic enzyme family.
      
 0.617
E0CR66_VITVI
Lipase_GDSL domain-containing protein; Belongs to the 'GDSL' lipolytic enzyme family.
      
 0.617
F6I2X3_VITVI
3-ketoacyl-CoA synthase.
      
 0.615
VITISV_007940
Uncharacterized protein.
      
 0.613
D7SIG5_VITVI
Uncharacterized protein.
      
 0.613
D7TNI7_VITVI
Uncharacterized protein.
      
 0.613
GolS2
Hexosyltransferase; Belongs to the glycosyltransferase 8 family.
      
 0.613
F6HGD8_VITVI
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
      
 0.613
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.