STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBL07Uncharacterized protein. (251 aa)    
Predicted Functional Partners:
CIPK09
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 0.836
D7TU83_VITVI
Peptidylprolyl isomerase.
   
 0.707
D7U483_VITVI
Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.637
CIPK03
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 0.516
CIPK02
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 0.516
CIPK17
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 0.478
SOS1
Cyclic nucleotide-binding domain-containing protein.
   
 0.463
F6GTI9_VITVI
Uncharacterized protein.
    
 
 0.440
CIPK018
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 0.421
TPC1
Ion_trans domain-containing protein.
    
 
 0.412
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
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