STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D7SVL5_VITVIProtein kinase domain-containing protein; Belongs to the protein kinase superfamily. (422 aa)    
Predicted Functional Partners:
F6I1N7_VITVI
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
  
 
 
0.902
RPS5
Ribosomal_S7 domain-containing protein; Belongs to the universal ribosomal protein uS7 family.
    
 
 0.614
F6I755_VITVI
Uncharacterized protein.
  
 
 0.441
F6I3K8_VITVI
Uncharacterized protein.
  
 
 0.440
D7SP56_VITVI
Uncharacterized protein; Belongs to the cytochrome P450 family.
    
 0.437
D7TZZ4_VITVI
Uncharacterized protein; Belongs to the cytochrome P450 family.
    
 0.437
F6HJ80_VITVI
RRM domain-containing protein.
   
    0.422
F6HEZ7_VITVI
Uncharacterized protein; Belongs to the cytochrome P450 family.
    
 0.416
rps2
30S ribosomal protein S2, chloroplastic.
    
 
 0.403
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
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