STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D7T540_VITVIGlyco_18 domain-containing protein; Belongs to the glycosyl hydrolase 18 family. (357 aa)    
Predicted Functional Partners:
D7TM08_VITVI
Beta-hexosaminidase.
    
 0.802
F6GYZ3_VITVI
Glyco_hydro_20 domain-containing protein.
    
 0.802
F6GZ26_VITVI
Beta-hexosaminidase.
    
 0.802
F6H7W3_VITVI
Uncharacterized protein.
    
 0.802
VITISV_031522
Cysteine proteinase inhibitor; Belongs to the cystatin family. Phytocystatin subfamily.
      
 0.614
F6HQQ3_VITVI
Cysteine proteinase inhibitor; Belongs to the cystatin family. Phytocystatin subfamily.
      
 0.614
F6HRL5_VITVI
Cysteine proteinase inhibitor; Belongs to the cystatin family. Phytocystatin subfamily.
      
 0.614
F6HV98_VITVI
Cysteine proteinase inhibitor; Belongs to the cystatin family. Phytocystatin subfamily.
      
 0.614
cox3
Cytochrome c oxidase subunit 3; Subunits I, II and III form the functional core of the enzyme complex.
    
 0.581
cox2
Cytochrome c oxidase subunit 2; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. Subunit 2 transfers the electrons from cytochrome c via its binuclear copper A center to the bimetallic center of the catalytic subunit 1.
    
 0.515
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
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