STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D7U2H1_VITVIUncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family. (193 aa)    
Predicted Functional Partners:
F6HHX2_VITVI
WD_REPEATS_REGION domain-containing protein.
   
 0.985
D7UBR9_VITVI
WD_REPEATS_REGION domain-containing protein.
   
 0.978
F6HFH8_VITVI
WD_REPEATS_REGION domain-containing protein.
   
 0.977
VITISV_040760
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
   
 0.953
D7UAK0_VITVI
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
   
 0.953
F6HVQ7_VITVI
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
   
 0.953
D7TCU0_VITVI
Uncharacterized protein.
   
 0.903
F6H1Z6_VITVI
Uncharacterized protein.
   
 0.903
F6HDY2_VITVI
Uncharacterized protein.
    
 0.848
D7U2U3_VITVI
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
    
 0.846
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
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