STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D7U6H3_VITVIUncharacterized protein. (448 aa)    
Predicted Functional Partners:
D7UBU8_VITVI
Uncharacterized protein; Belongs to the cytochrome P450 family.
   
 
  0.907
E0CVM7_VITVI
Uncharacterized protein; Belongs to the cytochrome P450 family.
     
  0.902
F6HUB7_VITVI
Uncharacterized protein; Belongs to the cytochrome P450 family.
   
 
  0.901
F6I641_VITVI
Uncharacterized protein; Belongs to the cytochrome P450 family.
   
 
  0.901
F6HPP7_VITVI
Uncharacterized protein.
   
 
  0.900
F6HHQ0_VITVI
Uncharacterized protein.
     
 0.637
F6HU35_VITVI
Uncharacterized protein.
    
 0.630
F6GZL3_VITVI
Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.
    
 0.623
F6GVP0_VITVI
Cellulase domain-containing protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
   
 
 0.620
F6H4J1_VITVI
Uncharacterized protein.
    
 
 0.619
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
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