STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D7U732_VITVIPectinesterase. (369 aa)    
Predicted Functional Partners:
D7TM47_VITVI
Pectate lyase.
  
 
 0.757
F6HQX5_VITVI
Pectate lyase.
  
 
 0.747
D7TRP9_VITVI
Pectate lyase.
  
 
 0.745
F6H7G9_VITVI
Pectate lyase.
  
 
 0.732
D7TM46_VITVI
Pectate lyase.
  
 
 0.730
E7BTN4_VITVI
Pectate lyase.
  
 
 0.730
VITISV_042447
Pectate lyase.
  
 
 0.728
F6GTA3_VITVI
Pectate lyase.
  
 
 0.724
F6I555_VITVI
Pectate lyase.
  
  
  0.722
PEL
Pectate lyase.
  
 
 0.718
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.