STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6GTV5_VITVIGlyco_hydro_18 domain-containing protein; Belongs to the glycosyl hydrolase 18 family. (307 aa)    
Predicted Functional Partners:
E0CQU0_VITVI
Uncharacterized protein.
    
 
 0.647
F6H650_VITVI
Uncharacterized protein.
   
  
 0.627
D7TNB2_VITVI
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
  
 0.621
F6H1E4_VITVI
Phytocyanin domain-containing protein.
    
 
 0.620
VITISV_020070
14_3_3 domain-containing protein; Belongs to the 14-3-3 family.
      
 0.618
F6HZ63_VITVI
Pectinesterase; In the C-terminal section; belongs to the pectinesterase family.
      
 0.618
F6H3U9_VITVI
Aspartate aminotransferase.
      
 0.616
F6H766_VITVI
Uncharacterized protein; Belongs to the peptidase S8 family.
      
 0.613
F6H755_VITVI
Uncharacterized protein; Belongs to the peptidase S8 family.
      
 0.612
F6H7L5_VITVI
Lactoylglutathione lyase; Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.
      
 0.612
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.