STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6GWF8_VITVIUSP domain-containing protein. (66 aa)    
Predicted Functional Partners:
D7SW90_VITVI
Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family.
   
 
 0.583
D7SYW0_VITVI
Ribosomal_S27 domain-containing protein.
   
  0.509
F6HZD7_VITVI
Ubiquitin-like domain-containing protein.
   
  0.507
VITISV_037877
Ubiquitin-like domain-containing protein.
    
  0.506
D7SYW1_VITVI
Ribosomal_S27 domain-containing protein.
    
  0.506
F6I3P8_VITVI
Ubiquitin-like domain-containing protein.
    
  0.506
VITISV_019064
OTU domain-containing protein.
   
  
 0.492
D7SQ20_VITVI
Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family.
   
  
 0.409
D7SMT1_VITVI
Uncharacterized protein.
      
 0.405
D7U1X7_VITVI
Uncharacterized protein.
   
 0.405
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
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