STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6GYD3_VITVIPABC domain-containing protein. (42 aa)    
Predicted Functional Partners:
F6HMF0_VITVI
Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.
    
 0.715
ABH1
MIF4G domain-containing protein.
    
 0.698
F6GVD5_VITVI
MI domain-containing protein.
   
 0.692
F6H343_VITVI
MI domain-containing protein.
   
 0.692
F6HYK5_VITVI
MI domain-containing protein.
   
 0.692
D7TZU9_VITVI
LsmAD domain-containing protein.
   
 
 0.672
D7TTH5_VITVI
Helicase ATP-binding domain-containing protein.
    
 0.665
F6H8U4_VITVI
Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.
    
 0.660
F6HZP8_VITVI
Cellulose synthase; Belongs to the glycosyltransferase 2 family. Plant cellulose synthase subfamily.
    
 0.660
D7T5N2_VITVI
Uncharacterized protein.
   
    0.658
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
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