STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6H030_VITVIDirigent protein; Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism. (655 aa)    
Predicted Functional Partners:
D7U1I5_VITVI
Uncharacterized protein.
   
    0.658
F6HQV0_VITVI
HECT domain-containing protein.
   
 
 0.629
F6GWK5_VITVI
HECT domain-containing protein.
   
 
 0.610
F6I105_VITVI
HECT domain-containing protein.
   
 
 0.610
F6I1J3_VITVI
Uncharacterized protein.
   
 
 0.610
VITISV_003357
RING-type domain-containing protein.
    
 0.606
D7TZR0_VITVI
RING-type domain-containing protein.
    
 0.606
VITISV_012429
Ubiquitin-like domain-containing protein.
    
  0.596
D7TDQ8_VITVI
Ubiquitin-like domain-containing protein.
    
  0.596
E0CVA2_VITVI
Ubiquitin-like domain-containing protein.
    
  0.596
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
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