STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6H5N9_VITVIUncharacterized protein. (673 aa)    
Predicted Functional Partners:
D7TPJ4_VITVI
Uncharacterized protein; Belongs to the CGI121/TPRKB family.
   
 0.961
D7TZ32_VITVI
Peptidase_M22 domain-containing protein.
  
 0.888
D7U1R4_VITVI
Peptidase_M22 domain-containing protein.
  
 0.888
GCP1
Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in mitochondrial tRNAs that read codons beginning with adenine. Probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37. Involved in mitochondrial genome maintenance.
  
 0.873
D7TIZ8_VITVI
Glycos_transf_N domain-containing protein.
    
 0.739
D7T3T8_VITVI
Uncharacterized protein.
    
 0.573
D7SKX9_VITVI
YrdC-like domain-containing protein.
   
  
 0.450
D7TDY8_VITVI
tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit; Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit. Belongs to the WD repeat TRM82 family.
   
 
 0.417
F6HPI9_VITVI
Uncharacterized protein.
  
     0.415
F6GTF1_VITVI
BSD domain-containing protein.
  
     0.402
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.