STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6HH91_VITVIAP2/ERF domain-containing protein. (204 aa)    
Predicted Functional Partners:
D7SH38_VITVI
NAC domain-containing protein.
      
 0.623
D7U600_VITVI
NAC domain-containing protein.
      
 0.623
F6HE54_VITVI
Uncharacterized protein.
      
 0.616
F6HZF5_VITVI
Uncharacterized protein.
      
 0.616
D7TI02_VITVI
PlsC domain-containing protein.
      
 0.615
D7TV59_VITVI
Uncharacterized protein.
      
 0.615
COQ5
2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial; Methyltransferase required for the conversion of 2- polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3-methyl- 6-methoxy-1,4-benzoquinol (DMQH2).
      
 0.614
F6H3S9_VITVI
3-ketoacyl-CoA synthase.
      
 0.614
F6HJE7_VITVI
3-ketoacyl-CoA synthase.
      
 0.614
VITISV_033098
Uncharacterized protein.
      
 0.613
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
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