STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6HLL0_VITVIC-CAP/cofactor C-like domain-containing protein. (568 aa)    
Predicted Functional Partners:
D7U325_VITVI
Uncharacterized protein.
  
 
   0.611
D7T6H5_VITVI
Uncharacterized protein.
  
 
   0.596
D7SLN4_VITVI
Transket_pyr domain-containing protein.
      
 0.593
D7T1L4_VITVI
Protein kinase domain-containing protein.
      
 0.569
D7TYZ1_VITVI
T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.
   
  
 0.557
F6HXA6_VITVI
Uncharacterized protein.
      
 0.501
F6HXA7_VITVI
Uncharacterized protein.
      
 0.501
D7U040_VITVI
Uncharacterized protein.
      
 0.499
F6H607_VITVI
Uncharacterized protein.
    
   0.495
F6H608_VITVI
Uncharacterized protein.
    
   0.495
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
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