STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6HNE4_VITVIArsA_ATPase domain-containing protein. (416 aa)    
Predicted Functional Partners:
F6HNK0_VITVI
DUF4283 domain-containing protein.
    
 0.887
F6H0H0_VITVI
TPR_REGION domain-containing protein.
   
 0.783
D7T959_VITVI
Uncharacterized protein.
   
 0.747
D7TT38_VITVI
Uncharacterized protein.
   
 0.747
F6HBT7_VITVI
Uncharacterized protein.
   
 0.747
D7SN33_VITVI
LMWPc domain-containing protein.
    
 0.599
D7T094_VITVI
LMWPc domain-containing protein.
    
 0.599
F6I363_VITVI
ATPase; ATPase required for the post-translational delivery of tail- anchored (TA) proteins to the endoplasmic reticulum. Recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol. This complex then targets to the endoplasmic reticulum by membrane-bound receptors, where the tail-anchored protein is released for insertion. This process is regulated by ATP binding and hydrolysis. ATP binding drives the homodimer towards the closed dimer state, facilitating recognition of newly synthesized TA membrane proteins. ATP hydrolysis is required for insertion. Subseq [...]
  
  
 
0.597
F6GU28_VITVI
ArsA_ATPase domain-containing protein.
  
  
 
0.544
F6H4U3_VITVI
ArsA_ATPase domain-containing protein.
     
  0.540
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
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