STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6HUZ2_VITVIPhospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily. (1180 aa)    
Predicted Functional Partners:
D7TKB5_VITVI
ALA-interacting subunit; Belongs to the CDC50/LEM3 family.
   
 0.561
F6H8E4_VITVI
ALA-interacting subunit; Belongs to the CDC50/LEM3 family.
   
 0.561
F6H9T8_VITVI
Uncharacterized protein.
   
 0.561
F6HCN3_VITVI
Uncharacterized protein.
   
 0.561
F6HWX9_VITVI
Uncharacterized protein.
   
 0.561
VITISV_025270
V-SNARE domain-containing protein.
      
 0.558
VITISV_010162
Tr-type G domain-containing protein.
      
 0.548
D7UBU1_VITVI
Tr-type G domain-containing protein.
      
 0.548
F6H9B6_VITVI
Tryptophan synthase.
      
 0.505
VVGAI1
DELLA1; Belongs to the GRAS family.
      
 0.420
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
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