STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6HVB5_VITVIUncharacterized protein. (601 aa)    
Predicted Functional Partners:
F6H1D0_VITVI
Uncharacterized protein.
   
 0.995
VITISV_004943
WD_REPEATS_REGION domain-containing protein.
    
 0.994
D7T1C3_VITVI
Uncharacterized protein.
    
 0.994
F6HFB7_VITVI
Tho2 domain-containing protein.
   
 0.979
D7TCM6_VITVI
Uncharacterized protein.
    
 0.977
D7SKJ4_VITVI
RRM domain-containing protein.
    
 0.972
D7TLX0_VITVI
RRM domain-containing protein.
    
 0.972
D7TSN8_VITVI
RRM domain-containing protein.
    
 0.972
F6HC41_VITVI
Tho2 domain-containing protein.
   
 0.907
F6HMF8_VITVI
Tho2 domain-containing protein.
   
 0.907
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.