STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6HYN1_VITVIUncharacterized protein. (263 aa)    
Predicted Functional Partners:
F6GTQ1_VITVI
WD_REPEATS_REGION domain-containing protein.
   
 0.973
F6HT40_VITVI
Autophagy protein 5; Required for autophagy.
   
 0.941
F6HXX7_VITVI
Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation. Belongs to the ATG12 family.
    
 0.935
D7TPK3_VITVI
Uncharacterized protein.
    
 
 0.898
D7TDH7_VITVI
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
     
 0.843
F6HGX9_VITVI
Uncharacterized protein.
     
 0.843
F6HZI0_VITVI
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.
   
 
 0.817
D7UCP5_VITVI
Uncharacterized protein.
   
 0.800
ATG6
Uncharacterized protein.
   
 0.800
F6H6S3_VITVI
ATG7_N domain-containing protein.
    
 0.799
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.